Search details
1.
Burden and Trends of Symptomatic Sexually Transmitted Infections in Malawi From 2000 to 2021: Comparative Analysis of Survey and Case Report Data.
Sex Transm Dis
; 51(3): 206-213, 2024 Mar 01.
Article
in English
| MEDLINE | ID: mdl-38412467
2.
Estimating the epidemic reproduction number from temporally aggregated incidence data: A statistical modelling approach and software tool.
PLoS Comput Biol
; 19(8): e1011439, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37639484
3.
Scoring epidemiological forecasts on transformed scales.
PLoS Comput Biol
; 19(8): e1011393, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37643178
4.
Bayesian reconstruction of household transmissions to infer the serial interval of COVID-19 by variants of concern: analysis from a prospective community cohort study (Virus Watch).
Lancet
; 400 Suppl 1: S40, 2022 11.
Article
in English
| MEDLINE | ID: mdl-36929985
5.
Comparing human and model-based forecasts of COVID-19 in Germany and Poland.
PLoS Comput Biol
; 18(9): e1010405, 2022 09.
Article
in English
| MEDLINE | ID: mdl-36121848
6.
Non-pharmaceutical interventions, vaccination, and the SARS-CoV-2 delta variant in England: a mathematical modelling study.
Lancet
; 398(10313): 1825-1835, 2021 11 13.
Article
in English
| MEDLINE | ID: mdl-34717829
7.
PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised HIV epidemics developed in the context of the HPTN 071 (PopART) trial.
PLoS Comput Biol
; 17(9): e1009301, 2021 09.
Article
in English
| MEDLINE | ID: mdl-34473700
8.
A Comparative Analysis of Statistical Methods to Estimate the Reproduction Number in Emerging Epidemics, With Implications for the Current Coronavirus Disease 2019 (COVID-19) Pandemic.
Clin Infect Dis
; 73(1): e215-e223, 2021 07 01.
Article
in English
| MEDLINE | ID: mdl-33079987
9.
A Quantitative Framework for Defining the End of an Infectious Disease Outbreak: Application to Ebola Virus Disease.
Am J Epidemiol
; 190(4): 642-651, 2021 04 06.
Article
in English
| MEDLINE | ID: mdl-33511390
10.
The role of rapid diagnostics in managing Ebola epidemics.
Nature
; 528(7580): S109-16, 2015 Dec 03.
Article
in English
| MEDLINE | ID: mdl-26633764
11.
When are pathogen genome sequences informative of transmission events?
PLoS Pathog
; 14(2): e1006885, 2018 02.
Article
in English
| MEDLINE | ID: mdl-29420641
12.
Bayesian inference of transmission chains using timing of symptoms, pathogen genomes and contact data.
PLoS Comput Biol
; 15(3): e1006930, 2019 03.
Article
in English
| MEDLINE | ID: mdl-30925168
13.
A graph-based evidence synthesis approach to detecting outbreak clusters: An application to dog rabies.
PLoS Comput Biol
; 14(12): e1006554, 2018 12.
Article
in English
| MEDLINE | ID: mdl-30557340
14.
Unraveling the drivers of MERS-CoV transmission.
Proc Natl Acad Sci U S A
; 113(32): 9081-6, 2016 08 09.
Article
in English
| MEDLINE | ID: mdl-27457935
15.
outbreaker2: a modular platform for outbreak reconstruction.
BMC Bioinformatics
; 19(Suppl 11): 363, 2018 Oct 22.
Article
in English
| MEDLINE | ID: mdl-30343663
16.
Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.
Mol Biol Evol
; 34(1): 185-203, 2017 01.
Article
in English
| MEDLINE | ID: mdl-28053012
17.
Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting.
Genome Res
; 25(1): 111-8, 2015 Jan.
Article
in English
| MEDLINE | ID: mdl-25491771
18.
Ebola virus disease in West Africa--the first 9 months of the epidemic and forward projections.
N Engl J Med
; 371(16): 1481-95, 2014 10 16.
Article
in English
| MEDLINE | ID: mdl-25244186
19.
International risk of yellow fever spread from the ongoing outbreak in Brazil, December 2016 to May 2017.
Euro Surveill
; 22(28)2017 Jul 13.
Article
in English
| MEDLINE | ID: mdl-28749337
20.
The Incidence Patterns Model to Estimate the Distribution of New HIV Infections in Sub-Saharan Africa: Development and Validation of a Mathematical Model.
PLoS Med
; 13(9): e1002121, 2016 09.
Article
in English
| MEDLINE | ID: mdl-27622516